22 lines
677 B
Plaintext
Executable File
22 lines
677 B
Plaintext
Executable File
#@UGENE_QUERY
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#
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#Open Reading Frame surrounded by repeat units
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query RepeatsWithOrf {
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Repeat { type: repeats; key: repeat_unit; min-length: 10; }
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ORF { type: orf; key: ORF; strand: direct; }
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Repeat.left--ORF.unit { type: distance; distance_type: end-to-start; min: 0; max: 5000; }
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ORF.unit--Repeat.right { type: distance; distance_type: end-to-start; min: 0; max: 5000; }
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.meta{
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visual{
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Repeat.left { geometry: 35,30,229,120,120; }
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Repeat.right { geometry: 504,30,238,120,120; }
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ORF.unit { geometry: 302,149,178,160,160; }
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}
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order { Repeat;ORF; }
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}
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} |